Package: pcgen 0.2.0
pcgen: Reconstruction of Causal Networks for Data with Random Genetic Effects
Implements the pcgen algorithm, which is a modified version of the standard pc-algorithm, with specific conditional independence tests and modified orientation rules. pcgen extends the approach of Valente et al. (2010) <doi:10.1534/genetics.109.112979> with reconstruction of direct genetic effects.
Authors:
pcgen_0.2.0.tar.gz
pcgen_0.2.0.zip(r-4.5)pcgen_0.2.0.zip(r-4.4)pcgen_0.2.0.zip(r-4.3)
pcgen_0.2.0.tgz(r-4.4-any)pcgen_0.2.0.tgz(r-4.3-any)
pcgen_0.2.0.tar.gz(r-4.5-noble)pcgen_0.2.0.tar.gz(r-4.4-noble)
pcgen_0.2.0.tgz(r-4.4-emscripten)pcgen_0.2.0.tgz(r-4.3-emscripten)
pcgen.pdf |pcgen.html✨
pcgen/json (API)
| # Install 'pcgen' in R: |
| install.packages('pcgen', repos = c('https://pariya.r-universe.dev', 'https://cloud.r-project.org')) |
- simdata - Simulated data
This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.
Last updated 6 years agofrom:21d533258c. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Oct 31 2024 |
| R-4.5-win | OK | Oct 31 2024 |
| R-4.5-linux | OK | Oct 31 2024 |
| R-4.4-win | OK | Oct 31 2024 |
| R-4.4-mac | OK | Oct 31 2024 |
| R-4.3-win | OK | Oct 31 2024 |
| R-4.3-mac | OK | Oct 31 2024 |
Exports:checkGgencovTestgetResidualspcgenpcgenFastpcgenTestpcRes
Dependencies:abindbackportsbase64encbdsmatrixBHBiocGenericsBiocManagerbootbslibcachemcheckmatecliclueclustercolorspacecorpcorcpp11crayondata.tableDEoptimRdigestevaluatefansifarverfastICAfastmapfontawesomeforeignFormulafsgenericsggmggplot2gluegraphgridExtragtablehighrHmischtmlTablehtmltoolshtmlwidgetsigraphisobandjquerylibjsonliteknitrlabelinglatticelifecyclelme4lmtestmagrittrMASSMatrixmemoisemgcvmimeminqamunsellnlmenloptrnnetpcalgpillarpkgconfigR6rappdirsRBGLRColorBrewerRcppRcppArmadilloRcppEigenRcppProgressrlangrmarkdownrobustbaserpartrstudioapisassscalessfsmiscsommerstringistringrtibbletinytexutf8vcdvctrsviridisviridisLitewithrxfunyamlzoo
